Bio-IT Briefs - Sept. 24, 2008



Software providers Tibco Software and Integromics announced the Integromics Biomarker Discovery solution for Tibco Spotfire. The product offers a direct, interactive, visual approach to data analysis that rapidly reveals insights and unexpected relationships in genomics data, and helps scientists categorize complex patterns. With interactive analysis and high-impact visualization capabilities, the product helps researchers examine the expression and annotation dimensions of their data and perform a variety of numerical analyses. Pharmas can also use Spotfire as a flexible analytics platform to allow them to combine and analyze new types of data in order to more quickly pursue their hypotheses and research strategies. Read the press release.

The National Institutes of Health announced that it has increased its support of high-impact research with 2008 NIH Director's Pioneer and New Innovator Awards to 47 scientists, many of whom are in the early stages of their careers. The grants, estimated to be up to $138 million over five years, enable recipients to pursue exceptionally innovative approaches that could transform biomedical and behavioral science. Now in its fifth year, the Pioneer Award program has made 63 awards, 16 of them in 2008. The New Innovator Award program, launched in 2007, supports 61 investigators -- 30 selected last year and 31 more this year. Each Pioneer Award provides $2.5 million in direct costs over five years. New Innovator Awards are for $1.5 million in direct costs over the same time period. Read the press release.

Sigma-Aldrich has published  its first peer-reviewed video protocol in the PubMed accessible Journal of Visualized Experiments (JoVE). This makes Sigma-Aldrich the first life science company to submit a video protocol to the traditional scientific publication process. Peer-reviewed video protocols are an innovative and highly effective tool to increase the efficiency of scientific communication and with it the speed of basic research and drug discovery. "Producing peer reviewed resources and making them available in locations that researchers trust is an invaluable tool for the research community," said John Custer, Marketing Manager-Biochemistry for Sigma-Aldrich. "We look forward to hearing our customers' feedback while we continue working on additional video protocols." Read the press release.

LabKey Software, a provider of open source software that enables teams of researchers to pursue large-scale, collaborative projects, announced it has joined the Microsoft BioIT Alliance. The BioIT Alliance is an association of life science organizations and informatics companies whose focus is to enhance collaboration and accelerate the pace of drug and vaccine discovery and development. "We see two strong trends in biomedical research, data dependence and collaboration," said Peter Hussey, a founding partner at LabKey Software. "The diversity of diagnostic technologies and laboratory instruments presents researchers with the daunting task of managing and integrating the data. We look forward to working with other BioIT Alliance members who share our belief that well-designed and well-executed information systems can make a huge difference in the success of highly collaborative research projects.” Read the press release.

The National Foundation for Cancer Research, a Bethesda, MD-based cancer research non-profit, and InhibOx, a computational drug discovery company in Oxford, U.K., have jointly launched the computational drug screening tool DrugFinder. Using a web-based interface, researchers will be able to submit a target structure together with a known inhibitor compound to the DrugFinder service. InhibOx will use its in-house computing facilities and expertise to screen chemical compound database against the target. The docking and ligand-based approaches will be used in combination during the screening process and the "hit" compounds identified will be returned to the user. Part of the service is offered to the public free of charge. Read the press release.

Invitrogen Corp. and  Applied Biosystems Inc. announced the divisional structure and the executive leadership team for the combination of the two companies. The new structure will become effective upon close of the proposed merger, which is conditional upon shareholder and European Commission approvals. The new company’s four business divisions, focused on core competencies, are:  Molecular Biology Systems, Genetic Systems, Cell Systems, and Mass Spectrometry Systems.  Read the press release.

 

 

 

 

Click here to login and leave a comment.  

0 Comments

Add Comment

Text Only 2000 character limit

Page 1 of 1



White Papers & Special Reports

sgi whp 2
Managing the Modern Genomics Data Flood
Sponsored by SGI

Managing and storing the perfect storm of multi-disciplined data pouring from next generation sequencers and other omics instruments is a central challenge in life sciences. Discover in this paper how the SGI ArcFiniti storage solution, optimized for unstructured genomics and life sciences data can: 

  • Reduce costs, proactively protect data integrity, and deliver the high performance I/O required for genomics data processing and analysis.  
  • Effectively manage capacities from 156TB to 1.4PB as a disk based, integrated hardware and software platform 


sgi - whp 1
Turning Genomics Data into Practical Insight
Sponsored by SGI

With worldwide sequencing capacity approaching 13 quadrillion DNA bases annually turning genomics data into knowledge is a true computational challenge. Read this paper and learn how the SGI UV coherent shared memory platform can:  

  • Speed results time while cost competitively tackling the most difficult computational problems across all omics disciplines. 
  • Push performance by scaling to extraordinary levels, up to 256 sockets (2,560 cores, 4,096 threads) per single system (one OS image). 

Provide support for up to 16TB of coherent shared memory in a single system image enabling extreme efficiency across a wide range of compute demands. 



accerlys-logo_2012_wh
New Complimentary Market Survey…
Collaborations and Communications Within Drug Discovery Research
Sponsored by Accelrys
This survey was conducted by the Cambridge Healthtech Media Group in January, 2012. It was sponsored by Accelrys related to their HEOS initiative to gather valid information around externalizing collaborative research while improving communications in the cloud. With 310 qualified industry respondents the survey findings reveal useful usage and trends patterns.  An insightful follow-on discussion and webinar related to this survey, and the HEOS by Scynexis SaaS portal is also available on the Bio-IT World website for complementary viewing.
 


Job Openings

tessella logo 
Scientific Software Engineer
Boston MA
$70,000 to $95,000
 

Tessella delivers software engineering and consulting services to leading pharmaceutical and biotech companies. We are recruiting Software Engineersto work with skilled bioinformaticians and scientists to identify business needs and recommend and develop technical solutions. Applicants require BS, MS or PhD in bioinformatics, biology or chemistry and 2+ years of software development in either: Java, C#, C++, C or VB.NET. 

Apply at http://jobs.tessella.com   

 

oxford nanopore logo 


 Early Access Collaborations Managers
Oxford Nanopore Technologies is developing a novel technology, GridIONTM for the direct, electronic analysis of DNA/RNA and other analytes.  As the system approaches the market, we are building a team of technically knowledgeable, highly motivated candidates with excellent customer service and facilitation skills to join our company as Collaboration Managers.  This is a unique opportunity to work with world-leading genomics customers throughout the early adoption phase of a new generation of DNA sequencing technology.. This is a facilitative, enabling role with responsibility for managing technology development collaborations with key customers at leading genomics institutions.  It will include long term management of the collaboration plan and milestones and associated meetings and documentation. Click here to find out more and apply   

Oxford Nanopore's GridION technology, VP, Sales and Marketing Oxford Nanopore Technologies is a fast-moving technology company that is developing a novel electronic molecular analysis technology. The technology is adaptable for the analysis of DNA/RNA, proteins, chemicals and other molecules.  It is therefore suitable for use in a variety of markets including scientific research and clinical applications.  As the technology approaches the market, Oxford Nanopore is seeking a visionary VP of sales and marketing to join the senior team.  The candidate will embrace the opportunities afforded by entering the market with a truly disruptive technology that has the potential to expand the number of users and the variety of applications in each target market.  This is a rare opportunity to influence the commercial strategy at an early phase of its commercial lifetime, in a well funded company.  Oxford Nanopore welcomes applications from candidates with a track record of high-level strategic commercial  leadership, who wish to apply a fresh approach to existing markets.  Experience in Life Sciences/DNA sequencing is central to this role, however we will consider your application if you have experience of disruptive technologies in other related industries.  We are particularly interested in candidates with strong expertise in the use of digital technologies for sales and marketing of scientific/technical products.  Click to  Apply  


 

For reprints and/or copyright permission, please contact  Tim McLucas, (781) 972-1342, tmclucas@healthtech.com .