Think Bioinformatics, Think Buffalo


By Malorye Branca

October 15, 2003 | BUFFALO, N.Y. — The University at Buffalo is getting high-profile help in fulfilling its goal of becoming a bioinformatics heavyweight. Its first "Frontiers in Bioinformatics" symposium in June featured, along with renowned bioinformaticians, Sen. Hillary Rodham Clinton. The Democratic senator from New York and U.S. Rep. Thomas M. Reynolds, R-N.Y., were honored for their support of the university's new Center of Excellence in Bioinformatics.

 Buffalo Hillary: University at Buffalo president William R. Greiner awarded Sen. Hillary Clinton the university's Igniting Ideas Award. 
Clinton, Reynolds, and a long list of community, university, and state government representatives have helped generate almost $300 million in funding and commitments for the new center. The goal is to make Buffalo a world leader in bioinformatics by merging supercomputing, genomics, bioimaging, and other disciplines. "I am hopeful that when people think of bioinformatics, they will think of Buffalo," Clinton said.

"Now that we have mapped the human genome, we will all be uninsurable," she added, predicting that in 5 to 10 years, tests would be available to reveal inherited risk of many diseases, including diabetes and heart disease. According to Clinton, this development raises challenges to the insurance industry and many other groups. It also reinforces the need for treatment breakthroughs.

Jeffrey Skolnick, director of the center, said his group obviously won't be "developing billion-dollar molecules tomorrow," but despite the dismal performance of the bioinformatics business sector, he sees great opportunity ahead. "The bioinformatics business boom happened too early and promised too much," Skolnick said. "There is still a great deal to be done, and academic centers like ours can show industry the true potential of bioinformatics."

Skolnick said bioinformatics already offers practical tools for some difficult problems. For example, one of the center's key goals, he said, is to learn more about "what makes a protein target druggable." Skolnick's talk on that subject was one of the liveliest, and most controversial, at the symposium, which he aims to turn into an annual "Keystone meeting or a Gordon conference in systems biology." The next meeting will feature sessions on new topics, including disease pathogens, developmental biology, neurobiology, and drug discovery.

Back to Protein Structure Prediction in Drug Discovery 






White Papers & Special Reports

sgi whp 2
Managing the Modern Genomics Data Flood
Sponsored by SGI

Managing and storing the perfect storm of multi-disciplined data pouring from next generation sequencers and other omics instruments is a central challenge in life sciences. Discover in this paper how the SGI ArcFiniti storage solution, optimized for unstructured genomics and life sciences data can: 

  • Reduce costs, proactively protect data integrity, and deliver the high performance I/O required for genomics data processing and analysis.  
  • Effectively manage capacities from 156TB to 1.4PB as a disk based, integrated hardware and software platform 


sgi - whp 1
Turning Genomics Data into Practical Insight
Sponsored by SGI

With worldwide sequencing capacity approaching 13 quadrillion DNA bases annually turning genomics data into knowledge is a true computational challenge. Read this paper and learn how the SGI UV coherent shared memory platform can:  

  • Speed results time while cost competitively tackling the most difficult computational problems across all omics disciplines. 
  • Push performance by scaling to extraordinary levels, up to 256 sockets (2,560 cores, 4,096 threads) per single system (one OS image). 

Provide support for up to 16TB of coherent shared memory in a single system image enabling extreme efficiency across a wide range of compute demands. 



accerlys-logo_2012_wh
New Complimentary Market Survey…
Collaborations and Communications Within Drug Discovery Research
Sponsored by Accelrys
This survey was conducted by the Cambridge Healthtech Media Group in January, 2012. It was sponsored by Accelrys related to their HEOS initiative to gather valid information around externalizing collaborative research while improving communications in the cloud. With 310 qualified industry respondents the survey findings reveal useful usage and trends patterns.  An insightful follow-on discussion and webinar related to this survey, and the HEOS by Scynexis SaaS portal is also available on the Bio-IT World website for complementary viewing.
 


Job Openings

tessella logo 
Scientific Software Engineer
Boston MA
$70,000 to $95,000
 
Apply at http://jobs.tessella.com   

oxford nanopore logo 


Early Access Collaborations ManagersClick here to find out more and apply   

Oxford Nanopore's GridION technology, VP, Sales and Marketing Click to  Apply  

For reprints and/or copyright permission, please contact  Tim McLucas, (781) 972-1342, tmclucas@healthtech.com .