PubMed Getting a Makeover



Loading...
The National Library of Medicine is giving a significant retooling to its PubMed search engine, and the enhancements are expected to make this venerable scientific research tool more powerful to use.

The project, called the Discovery Initiative, got fully under way in the summer of 2005, and users will see improvements to the website this year, said David Lipman, director of the library’s National Center for Biotechnology Information.

The goal is to make it easier for users to uncover information related to their query, which may remain harder to spot with the current system.

“You’ll see over the next year some significant changes in it, not so much to make it easier to use but to make it easier to make more discoveries with it,” he said.

This is great news for Dean Giustini, reference librarian at the Biomedical Branch Library of the Vancouver Hospital & Health Sciences Centre in British Columbia.

“Many life sciences researchers find PubMed difficult to use. It’s a database that, although you can get instant literature fairly quickly, to use all of the functionality, even librarians have some challenges keeping up,” Giustini said.

A person who finds a record on PubMed and clicks on it may not necessarily see a treasure trove of other documents and data that are linked to it, Lipman said. That will soon change.

“You have to poke around to see that [related information],” he said. “What we’ll do instead is, using computational tools, poke around for you and then put [the related information] right on the record.”

Lipman and his team have sought advice from Google, Microsoft’s MSN team and Amazon’s A9 search engine unit, and they have more carefully analyzed usage patterns on the PubMed website.

The work has been focused initially on re-engineering PubMed’s back end, so that improvements to the front end can be then be implemented, Lipman said. Other improvements are still being discussed and planned, he said.

As it is right now, PubMed has enjoyed great success. It processes about 70 million queries every month. About 2.25 terabytes of data are downloaded from the site every day. But Lipman isn’t satisfied.

“I find it very frustrating because we’ve connected up the scientific information in very precise and powerful ways,” Lipman said. “And yet very few of our users do more than very simple things with our site. It’s as if [they say], ‘That’s enough, I found the answer I’m looking for and I’m done.’ And we want them to find answers to questions they didn’t even know they had.”

Click here to login and leave a comment.  

0 Comments

Add Comment

Text Only 2000 character limit

Page 1 of 1

White Papers & Special Reports

Quantum
StorNext 4.0: Technical Product Brief
Sponsored by Quantum

 
Proven in the world’s most data intensive industries, Quantum StorNext is a scalable, high-performance file system which allows data sharing across Linux, Mac, Unix, and Windows operating systems and manages data in enterprise storage environments. In this Technical Brief you'll learn:

  • How a high-performing file system can accelerate your business
  • How to simplify your data management
  • How a tiered storage approach can save you money


SURETY-IP_WPx108
Protect Your Scientific Intellectual Property: Proof of Lab Informatics Data Authenticity is Your Best Legal Defense
Sponsored by Surety, LLC

As a bio-technology or life sciences organization, your formulas, treatments and research and discoveries are the “lifeblood” of your business. But if you aren't protecting the integrity of your scientific data in your lab informatics systems, you risk losing IP ownership, revenue and consequently your business if you can't prove time-of-creation and data authenticity. Learn how you can implement simple, cost-effective and automated controls to protect your scientific intellectual property. Consider:

  • IP protection requirements in bio-pharma and other science-oriented industries can extend out 20, 30, 40 or more years
  • Most electronic lab management solutions include generic authenticity controls, so how "legally defensible" is yours?
  • Only standards-compliant, independent controls can future-proof your approach to long-term IP integrity protection and authenticity.
  • Learn more - get the free whitepaper now


BlueArc_WP_DataMigration.jpg
The Key to Life Sciences Data Management: Transparent Migration
Sponsored by BlueArc

Life sciences organizations face new data management challenges as the volume of research data grows and more data is kept online for longer times. Read this paper to learn about:

  • The benefits of transparent data migration (TDM)
  • How TDM technologies can simplify data management.
  • How using TDM can help increase storage utilization, improve computational workflow performance, and optimize the use of storage resources.


Life Science Webcasts & Podcasts

adobe_i3_btn_webinarNext-Generation Clinical Trial and Data Management Applications
Sponsored by Adobe

This webinar introduces i3Cube - a web-based, fully integrated, clinical trial and data management system built on Adobe’s LiveCycle® Enterprise Suite.  I3 cube provides end-to-end automation that delivers unprecedented visibility into information that sponsors need to accelerate the study process and complete trials efficiently. Viewers will learn more about:

  • Creating faster and more efficient trial processes
  • Reducing investigator burden 
  • Real-time sponsor transparency into study information
  • Enterprise solutions based on Adobe LiveCycle® ES utilizing cross-platform clients of Reader, Flash and AIR

    Download now.



More Podcasts

Job Openings

Employers -- Don't miss this opportunity to reach well-qualified life science candidates.

Loading...

For reprints and/or copyright permission, please contact The YGS Group, 3650 West Market Street, York, PA;

(717) 505-9701 ext. 125, or via email to Ashley.Zander@theYGSgroup.com.