Metatranscriptome Analysis Service Is Now Available at CD Genomics

November 1, 2022

The Bioinformatics-Analysis, a subdivision of CD Genomics, provides reliable next-generation and third-generation high-throughput sequencing data analysis, comprehensive technology services, database construction, and other related data analysis services. CD Genomics provides metatranscriptome sequencing data analysis service using bioinformatics analysis platform, which can comprehensively analyze the dynamic changes of microbial flora.


Metatranscriptome sequencing is a research tool to study the transcriptional situation and transcriptional regulation of all genomes in a specific environment and population at a specific time from a holistic level, which takes all RNAs in the ecological environment as the research object, avoiding the problem of difficult isolation and culture of microorganisms and can effectively expand the use of microbial resources. Compared with the metagenome, metatranscriptome can study the complex microbial community changes at the transcriptional level, and can better explore the potential new genes.


CD Genomics uses advanced sequencing platforms, such as the PacBio SMRT and Oxford Nanopore platforms, to help you accelerate your metatranscriptomic research. High-throughput coverage can comprehensively detect microbial information in the ecological environment, and fully mine the microbial diversity and dynamic changes in the sample. It has the advantages of short cycle, high throughput and full analysis, and has been widely used in the research of intestinal contents, soil, water body, oral cavity, etc.


“CD Genomics has a complete, efficient, sensitive and highly accurate metatranscriptome analysis pipeline. In addition to gene expression analysis and differential gene expression analysis, we can also perform species annotation and classification analysis, comparative analysis between multiple samples, etc.,” commented Senior Scientist of CD Genomics.


“Our high-quality data analysis platform will be used to generate high-quality analysis reports in a rapid analysis cycle. Information mining of metatranscriptome data by bioinformatics, and analysis of microbial species, genes, and pathways from G-based high-throughput sequencing data. Studying the transcription of the whole genome of a group of microorganisms and the regulation of transcription in a specific environment and over a certain period of time will help to mine the functional genes of microorganisms and explore their relationship mechanisms with the environment, diseases, plants and animals,” he further added.


CD Genomics’s metatranscriptome sequencing data analysis can be used for, but is not limited to, the following microorganisms:

Soil microorganisms

Silt microorganisms

Oral microbes

Marine microbes

Sewage microbes

Intestinal microorganisms

Fecal microorganisms

Microorganisms in extreme environments


Based on a high-throughput sequencing platform, CD Genomics can detect the overall transcript level of any species at the single nucleotide level. While analyzing the structure and expression levels of transcripts, it can also identify unknown transcripts and rare transcripts, and can accurately identify variable shear sites and coding sequence single nucleotide polymorphisms (cSNPs), thus providing the most comprehensive transcriptome information.


About CD Genomics

CD Genomics is one of the reliable providers of bioinformatics analysis services, with a high-performance computing platform and a bioinformatics analysis team dominated by Ph.D. and Master's degrees. CD Genomics uses cutting-edge bioinformatics analysis technology to carry out the main business of genomics, transcriptomics, microorganisms, epigenetics, proteomics, metabolomics, single-cell omics, and so on.



Address: Shirley, NY 11967, USA